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| Dittami, Simon M; Arboleda, Enrique; Auguet, Jean-christophe; Bigalke, Arite; Briand, Enora; Cardenas, Paco; Cardini, Ulisse; Decelle, Johan; Engelen, Aschwin; Eveillard, Damien; Gachon, Claire Mm; Griffiths, Sarah; Harder, Tilmann; Kayal, Ehsan; Kazamia, Elena; Lallier, François H; Media, Monica; Marzinelli, Ezequiel M; Morganti, Teresa; Nunez Pons, Laura; Prado, Soizik; Pintado, José; Saha, Mahasweta; Selosse, Marc-andré; Skillings, Derek; Stock, Willem; Sunagawa, Shinichi; Toulza, Eve; Vorobev, Alexey; Leblanc, Catherine; Not, Fabrice. |
| Host-microbe interactions play crucial roles in marine ecosystems, but we still have very little understanding of the mechanisms that govern these relationships, the evolutionary processes that shape them, and their ecological consequences. The holobiont concept is a renewed paradigm in biology that can help describe and understand these complex systems. It posits that a host and its associated microbiota, living together in a long-lasting relationship, form the holobiont, and have to be studied together, as a coherent biological and functional unit, in order to understand the biology, ecology and evolution of the organisms. Here we discuss critical concepts and opportunities in marine holobiont research and identify key challenges in the field. We... |
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| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00480/59209/61904.pdf |
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| Brunet, Maéva; De Bettignies, Florian; Le Duff, Nolwen; Tanguy, Gwenn; Davoult, Dominique; Leblanc, Catherine; Gobet, Angelique; Thomas, François. |
| Kelps are dominant primary producers in temperate coastal ecosystems. Large amounts of kelp biomass can be exported to the seafloor during the algal growth cycle or following storms, creating new ecological niches for the associated microbiota. Here, we investigated the bacterial community associated with the kelp Laminaria hyperborea during its accumulation and degradation on the seafloor. Kelp tissue, seawater and sediment were sampled during a six‐month in situ experiment simulating kelp detritus accumulation. Evaluation of the epiphytic bacterial community abundance, structure, taxonomic composition and predicted functional profiles evidenced a biphasic succession. Initially dominant genera (Hellea, Litorimonas, Granulosicoccus) showed a rapid and... |
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| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00666/77808/79983.pdf |
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| Creis, Emeline; Delage, Ludovic; Charton, Sophie; Goulitquer, Sophie; Leblanc, Catherine; Potin, Philippe; Gall, Erwan Ar. |
| A role as UV sunscreens has been suggested for phlorotannins, the phenolic compounds that accumulate in brown algae in response to a number of external stimuli and take part in cell wall structure. After exposure of the intertidal brown alga Fucus vesiculosus to artificial UV-B radiation, we examined its physiological responses by following the transcript level of the pksIII gene encoding a phloroglucinol synthase, likely to be involved in the first step of phlorotannins biosynthesis. We also monitored the expression of three targeted genes, encoding a heat shock protein (hsp70), which is involved in global stress responses, an aryl sulfotransferase (ast), which could be involved in the sulfation of phlorotannins, and a vanadium bromoperoxidase (vbpo),... |
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| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00617/72869/71936.pdf |
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| Dittami, Simon M.; Barbeyron, Tristan; Boyen, Catherine; Cambefort, Jeanne; Collet, Guillaume; Delage, Ludovic; Gobet, Angelique; Groisillier, Agnes; Leblanc, Catherine; Michel, Gurvan; Scornet, Delphine; Siegel, Anne; Tapia, Javier E.; Tonon, Thierry. |
| Rhizobiales and related orders of Alphaproteobacteria comprise several genera of nodule-inducing symbiotic bacteria associated with plant roots. Here we describe the genome and the metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a member of a new candidate genus closely related to Rhizobiales and found in association with cultures of the filamentous brown algal model Ectocarpus. The "Ca. P. ectocarpi" genome encodes numerous metabolic pathways that may be relevant for this bacterium to interact with algae. Notably, it possesses a large set of glycoside hydrolases and transporters, which may serve to process and assimilate algal metabolites. It also harbors several proteins likely to be involved in the synthesis of algal hormones such as... |
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| Ano: 2014 |
URL: https://archimer.ifremer.fr/doc/00488/59944/63183.pdf |
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| Roussel, Sabine; Poitevin, Pierre; Day, Robert; Le Grand, Fabienne; Stiger‐pouvreau, Valérie; Leblanc, Catherine; Huchette, Sylvain. |
| While population foraging behaviour of herbivores has been extensively studied, individual choice is still poorly understood. Very few studies have focused on the individual consistency of foraging behaviour in marine herbivores. Because marine ectotherms are strongly influenced by their environment and because a mixed diet is appropriate for herbivores, we hypothesized that Haliotis tuberculata, a large marine gastropod, would not exhibit significant individual consistency in foraging activity and would display generalist food choices. To test these hypotheses, the behaviour of 120 abalone was studied using a choice test of eight macroalgal species over 3 weeks, with video recording 24 hr a day. In addition, primary components, secondary metabolites and... |
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Palavras-chave: Food choice; Foraging activity; Individual consistency; Intraclass correlation; Marine herbivore; Mollusc; Proportion similarity index. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00613/72465/71613.pdf |
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| Roussel, Sabine; Caralp, Claire; Leblanc, Catherine; Le Grand, Fabienne; Stiger-pouvreau, Valerie; Coulombet, Céline; Le Goïc, Nelly; Huchette, Sylvain. |
| The commercial culture of Haliotis tuberculata has recently started in Europe. As abalone is herbivorous, the use of local collected algae as feed may appear advantageous. The nutritional value of eight monospecific seaweed diets was studied using Palmaria palmata (Rhodophyta), filamentous algae, mainly Gracilaria sp. (Rhodophyta), Enteromorpha sp. and Ulva lactuca (Chlorophyta), together with Saccharina latissima, Saccorhiza polyschides, Laminaria digitata and Laminaria hyperborea (Ochrophyta, Phaeophyceae) and a mixed macroalgal diet. An integrative approach consisted in monitoring the seasonal composition changes of these algae in terms of protein, lipid, soluble carbohydrate, fatty acid and amino-acid contents, and to relate it to seasonal growth and... |
| Tipo: Text |
Palavras-chave: Abalone; Algae; Reproduction; Growth; Protein. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00509/62066/66246.pdf |
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| Gobet, Angelique; Mest, Laetitia; Perennou, Morgan; Dittami, Simon M.; Caralp, Claire; Coulombet, Celine; Huchette, Sylvain; Roussel, Sabine; Michel, Gurvan; Leblanc, Catherine. |
| Background: Holobionts have a digestive microbiota with catabolic abilities allowing the degradation of complex dietary compounds for the host. In terrestrial herbivores, the digestive microbiota is known to degrade complex polysaccharides from land plants while in marine herbivores, the digestive microbiota is poorly characterized. Most of the latter are generalists and consume red, green, and brown macroalgae, three distinct lineages characterized by a specific composition in complex polysaccharides, which represent half of their biomass. Subsequently, each macroalga features a specific epiphytic microbiota, and the digestive microbiota of marine herbivores is expected to vary with a monospecific algal diet. We investigated the effect of four... |
| Tipo: Text |
Palavras-chave: Microbe-host interactions; Digestive microbiota; Abalone; Macroalgae; Holobiont. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00489/60071/63368.pdf |
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